Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav3-4A0A075B654 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav3-4A0A075B654 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav3-4A0A075B654 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav3-4A0A075B654 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav3-4A0A075B654 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav3-4A0A075B654 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms