Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav4-2A0A075B638 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.33□□□□□ -0.11
Trav4-2A0A075B638 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-2A0A075B638 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-2A0A075B638 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-2A0A075B638 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.33□□□□□ -0.11
Trav4-2A0A075B638 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-2A0A075B638 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav4-2A0A075B638 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav4-2A0A075B638 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Gm27801-201ENSMUST00000184174 223 ntBASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav4-2A0A075B638 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.31□□□□□ -0.12
Trav4-2A0A075B638 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav4-2A0A075B638 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav4-2A0A075B638 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms