Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16nA0A075B634 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.69□□□□□ -0.22
Trav16nA0A075B634 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16nA0A075B634 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav16nA0A075B634 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav16nA0A075B634 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Gm14117-201ENSMUST00000122417 843 ntBASIC13.68□□□□□ -0.22
Trav16nA0A075B634 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Gm45102-201ENSMUST00000207427 857 ntBASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav16nA0A075B634 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Gm11421-201ENSMUST00000122124 294 ntBASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Rps24-207ENSMUST00000224568 714 ntBASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav16nA0A075B634 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav16nA0A075B634 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Gm27801-201ENSMUST00000184174 223 ntBASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Gm43137-201ENSMUST00000198052 594 ntBASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trav16nA0A075B634 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms