Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav4d-3A0A075B625 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav4d-3A0A075B625 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav4d-3A0A075B625 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav4d-3A0A075B625 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav4d-3A0A075B625 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms