Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC5.83□□□□□ -1.48
H2afb3S4R1G7 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Gm2767-201ENSMUST00000209582 473 ntBASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Gm8275-201ENSMUST00000219732 424 ntBASIC5.83□□□□□ -1.48
H2afb3S4R1G7 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Olfr488-201ENSMUST00000072968 945 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 AC174459.1-201ENSMUST00000224476 1943 ntBASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Gm43162-201ENSMUST00000198292 1770 ntBASIC5.83□□□□□ -1.48
H2afb3S4R1G7 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm37076-201ENSMUST00000192033 2294 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm43526-201ENSMUST00000196666 1565 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm24888-201ENSMUST00000104387 130 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Snord88a-201ENSMUST00000116723 90 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm13983-201ENSMUST00000118018 865 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm14900-201ENSMUST00000120304 733 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm14369-201ENSMUST00000121355 285 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm11787-201ENSMUST00000121996 1050 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm15274-201ENSMUST00000131442 291 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm21979-201ENSMUST00000139887 291 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm15259-201ENSMUST00000151262 291 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm23810-201ENSMUST00000175150 74 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm26587-201ENSMUST00000180795 989 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm43664-201ENSMUST00000196038 734 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm34144-201ENSMUST00000197039 259 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm43974-201ENSMUST00000205080 684 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm44830-201ENSMUST00000207667 584 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm45725-201ENSMUST00000212962 337 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 AC159819.1-201ENSMUST00000213911 328 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 AC153847.1-201ENSMUST00000214524 353 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 CT009539.1-201ENSMUST00000226465 220 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm5446-201ENSMUST00000091762 784 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
H2afb3S4R1G7 Gm37965-201ENSMUST00000195304 1362 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm30382-203ENSMUST00000199503 1858 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm24142-201ENSMUST00000101960 107 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm14755-201ENSMUST00000118037 384 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm14836-201ENSMUST00000118567 471 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm15621-201ENSMUST00000119162 364 ntBASIC5.81□□□□□ -1.48
H2afb3S4R1G7 Gm11976-201ENSMUST00000119236 295 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms