Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm18914-201ENSMUST00000214625 616 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Gm6991-201ENSMUST00000218475 1178 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 AC139568.1-201ENSMUST00000222878 486 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Olfr734-201ENSMUST00000050928 1033 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Gm5321-201ENSMUST00000072050 447 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 Snora44-201ENSMUST00000082670 129 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 Gm25515-201ENSMUST00000083858 157 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Vmn1r90-201ENSMUST00000185220 7144 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Mdm4-ps-201ENSMUST00000121299 6514 ntBASIC5.56□□□□□ -1.52
Scrt1Q99M85 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC5.56□□□□□ -1.52
Scrt1Q99M85 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm44215-201ENSMUST00000204910 2711 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Atp2b4-202ENSMUST00000112264 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 1700011H14Rik-205ENSMUST00000228936 3444 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm23440-201ENSMUST00000104299 130 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm25795-201ENSMUST00000104421 132 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm14805-201ENSMUST00000120172 340 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm12654-201ENSMUST00000120387 587 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm14237-201ENSMUST00000122080 430 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm23894-201ENSMUST00000158107 313 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm23071-201ENSMUST00000158242 115 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm8419-201ENSMUST00000189886 412 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm37203-201ENSMUST00000191618 385 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm42619-201ENSMUST00000197564 1136 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm4742-201ENSMUST00000200261 771 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm19653-201ENSMUST00000204326 1039 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm44111-201ENSMUST00000204649 399 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 AC154633.1-201ENSMUST00000223276 449 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 AC154573.2-201ENSMUST00000224174 378 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.55□□□□□ -1.52
Scrt1Q99M85 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Ccdc82-201ENSMUST00000110583 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Scrt1Q99M85 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Scrt1Q99M85 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 178.1 ms