Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Zfp317-203ENSMUST00000213725 2354 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Brf1Q8CFK2 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm42535-201ENSMUST00000197312 1399 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm37621-201ENSMUST00000194716 5531 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 AC154368.2-201ENSMUST00000222334 1724 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm15421-202ENSMUST00000118224 399 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm12442-201ENSMUST00000118372 338 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm12929-201ENSMUST00000122406 370 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Mnd1-ps-201ENSMUST00000162462 604 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Cfhr3-201ENSMUST00000170441 1022 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm26738-201ENSMUST00000181312 601 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm28060-201ENSMUST00000191554 189 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm44538-201ENSMUST00000205615 348 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 AC153968.2-201ENSMUST00000215579 1140 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm10145-201ENSMUST00000077776 462 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm10705-201ENSMUST00000098980 461 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Brf1Q8CFK2 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.2
Brf1Q8CFK2 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.2
Brf1Q8CFK2 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.59□□□□□ -1.2
Brf1Q8CFK2 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Brf1Q8CFK2 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 AC164107.1-202ENSMUST00000228953 1816 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm15765-201ENSMUST00000118407 910 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm15596-201ENSMUST00000121139 784 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm11882-201ENSMUST00000121463 506 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm15501-202ENSMUST00000140687 625 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm27005-201ENSMUST00000182783 921 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm37135-201ENSMUST00000192652 534 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm37215-201ENSMUST00000194927 1259 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm42983-201ENSMUST00000199879 815 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm4290-201ENSMUST00000206897 814 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm44869-201ENSMUST00000208836 357 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 AC147615.1-201ENSMUST00000218914 441 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 AC163743.1-201ENSMUST00000224309 270 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm10108-201ENSMUST00000078246 319 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm38142-201ENSMUST00000194093 3555 ntBASIC7.58□□□□□ -1.2
Brf1Q8CFK2 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
Brf1Q8CFK2 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms