Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm18833-201ENSMUST00000173218 862 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm17048-201ENSMUST00000179266 847 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm34768-201ENSMUST00000193884 565 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm4548-201ENSMUST00000208487 509 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 AC166574.3-201ENSMUST00000226725 367 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 AC114572.1-201ENSMUST00000227262 300 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 AC131687.1-201ENSMUST00000225931 5446 ntBASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Nup88Q8CEC0 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm37943-201ENSMUST00000194053 3944 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Npy2r-202ENSMUST00000098997 3325 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm43496-201ENSMUST00000201682 3001 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm12040-201ENSMUST00000118357 537 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm13455-201ENSMUST00000118767 517 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm14580-201ENSMUST00000119122 718 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm24687-201ENSMUST00000157758 241 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm22518-201ENSMUST00000158267 68 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Zfp169-202ENSMUST00000167682 411 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Mir7685-201ENSMUST00000183555 62 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm5334-201ENSMUST00000187472 720 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm37380-201ENSMUST00000193752 397 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm9517-201ENSMUST00000195021 874 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm43850-201ENSMUST00000202021 578 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm26226-201ENSMUST00000082509 116 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm25133-201ENSMUST00000082647 130 ntBASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Pdzph1-201ENSMUST00000025064 4174 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Nup88Q8CEC0 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm11242-201ENSMUST00000120103 2457 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm11925-201ENSMUST00000121375 535 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm23896-201ENSMUST00000158109 130 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm5027-201ENSMUST00000206700 375 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Gm9535-201ENSMUST00000218499 768 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 AC170086.2-201ENSMUST00000224733 803 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Nup88Q8CEC0 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms