Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm27295-201ENSMUST00000184264 153 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm37380-201ENSMUST00000193752 397 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm7804-202ENSMUST00000194187 854 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm2996-201ENSMUST00000211398 537 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm4556-201ENSMUST00000217808 355 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 AC105324.1-201ENSMUST00000227844 386 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gramd1b-204ENSMUST00000121357 7334 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm13270-201ENSMUST00000149137 1686 ntTSL 2 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Gm38325-201ENSMUST00000194507 1377 ntBASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Lrif1Q8CDD9 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm24888-201ENSMUST00000104387 130 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm14515-201ENSMUST00000121327 216 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm24812-201ENSMUST00000175315 284 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm27601-201ENSMUST00000184794 127 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm6009-201ENSMUST00000210848 280 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm19116-201ENSMUST00000218592 642 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm3785-201ENSMUST00000221000 202 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Gm9267-201ENSMUST00000222831 404 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Sfrp4-204ENSMUST00000222992 1062 ntTSL 5 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 AC164618.3-201ENSMUST00000224863 681 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 AC135086.1-201ENSMUST00000228621 817 ntBASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Lrif1Q8CDD9 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lrif1Q8CDD9 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Lrif1Q8CDD9 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Lrif1Q8CDD9 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.15□□□□□ -1.43
Lrif1Q8CDD9 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lrif1Q8CDD9 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Lrif1Q8CDD9 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.15□□□□□ -1.43
Lrif1Q8CDD9 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm11462-201ENSMUST00000117749 562 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm17121-201ENSMUST00000170414 847 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm4152-201ENSMUST00000172675 259 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm17222-201ENSMUST00000180135 847 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm38068-201ENSMUST00000192546 540 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm37477-201ENSMUST00000195215 884 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm20128-201ENSMUST00000196189 417 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 AC099760.1-201ENSMUST00000196300 153 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Gm44108-201ENSMUST00000203525 422 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.14□□□□□ -1.43
Lrif1Q8CDD9 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms