Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 AL589696.1-201ENSMUST00000225711 330 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 AC113125.2-201ENSMUST00000226837 362 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm2223-201ENSMUST00000112099 1350 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Gm10650-202ENSMUST00000196581 1969 ntBASIC8.72□□□□□ -1.01
Usp40Q8BWR4 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Usp40Q8BWR4 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Usp40Q8BWR4 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC8.71□□□□□ -1.01
Usp40Q8BWR4 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Usp40Q8BWR4 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC8.71□□□□□ -1.01
Usp40Q8BWR4 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.01
Usp40Q8BWR4 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Usp40Q8BWR4 Gm22370-201ENSMUST00000102422 83 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm7146-201ENSMUST00000116079 739 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm14957-201ENSMUST00000121069 817 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm9597-201ENSMUST00000171913 602 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm3489-201ENSMUST00000190083 528 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm43531-201ENSMUST00000200676 1114 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm2040-201ENSMUST00000202979 289 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm45326-201ENSMUST00000209234 721 ntTSL 3 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm2996-201ENSMUST00000211398 537 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Gm5949-201ENSMUST00000213468 1421 ntBASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Usp40Q8BWR4 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm44229-201ENSMUST00000203211 2487 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Mir700-201ENSMUST00000102169 79 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 n-R5s16-201ENSMUST00000104555 119 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm13641-201ENSMUST00000117993 473 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm14356-201ENSMUST00000118322 869 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm27030-201ENSMUST00000182551 464 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Mir3473g-201ENSMUST00000183494 136 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Mir7211-201ENSMUST00000184071 63 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Ighv1-44-201ENSMUST00000195597 352 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm5717-201ENSMUST00000198243 1062 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm19182-201ENSMUST00000207139 577 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm45724-201ENSMUST00000213031 420 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 AC115357.1-201ENSMUST00000227575 466 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm42544-201ENSMUST00000197868 3242 ntBASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Eps15-207ENSMUST00000175776 2802 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Usp40Q8BWR4 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Usp40Q8BWR4 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms