Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm43421-201ENSMUST00000200044 2905 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm42507-201ENSMUST00000201187 2555 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm14695-201ENSMUST00000121721 282 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm8869-201ENSMUST00000195222 947 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm19033-201ENSMUST00000208516 964 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm38366-201ENSMUST00000193127 1934 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Nkx3-1P97436 Gm42881-201ENSMUST00000198636 3344 ntBASIC5.48□□□□□ -1.53
Nkx3-1P97436 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm13854-201ENSMUST00000121183 1679 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm37278-201ENSMUST00000191619 2872 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 AC151904.1-201ENSMUST00000219945 1498 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm23440-201ENSMUST00000104299 130 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm13400-201ENSMUST00000117436 380 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm11624-201ENSMUST00000118579 1041 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm11318-201ENSMUST00000118640 961 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm25057-201ENSMUST00000157366 88 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm7952-201ENSMUST00000180540 984 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm28492-201ENSMUST00000190899 1019 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm37376-201ENSMUST00000192176 453 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm37770-201ENSMUST00000192855 772 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm7626-201ENSMUST00000195801 353 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm42753-201ENSMUST00000196718 1268 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm31861-201ENSMUST00000204563 672 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm45473-201ENSMUST00000211452 616 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm24405-201ENSMUST00000083033 167 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm24454-201ENSMUST00000083349 132 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Pja2-202ENSMUST00000024889 4345 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Gm5949-201ENSMUST00000213468 1421 ntBASIC5.47□□□□□ -1.53
Nkx3-1P97436 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Nkx3-1P97436 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms