Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm26419-201ENSMUST00000104272 133 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Serpina3h-202ENSMUST00000116393 1226 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm14201-201ENSMUST00000117627 289 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm8644-201ENSMUST00000118619 596 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm12988-201ENSMUST00000119054 478 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm6451-201ENSMUST00000121488 717 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm11263-201ENSMUST00000121853 749 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm14613-201ENSMUST00000122239 752 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm15242-201ENSMUST00000122459 283 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm23222-201ENSMUST00000158117 76 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm6245-201ENSMUST00000164699 768 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm23018-201ENSMUST00000177928 109 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm37493-201ENSMUST00000193167 433 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 AC162376.1-201ENSMUST00000220120 435 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC7.4□□□□□ -1.22
Hmgb1P63158 CT009711.2-202ENSMUST00000224538 973 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm25810-201ENSMUST00000082752 108 ntBASIC7.4□□□□□ -1.22
Hmgb1P63158 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 AC131720.1-201ENSMUST00000218629 2132 ntBASIC7.4□□□□□ -1.23
Hmgb1P63158 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
Hmgb1P63158 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Hmgb1P63158 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
Hmgb1P63158 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Hmgb1P63158 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
Hmgb1P63158 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
Hmgb1P63158 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 AC154406.1-201ENSMUST00000215220 2529 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 AC154354.1-201ENSMUST00000224585 2109 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm45793-201ENSMUST00000207900 1342 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm25083-201ENSMUST00000102319 92 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Agxt2-203ENSMUST00000110541 1222 ntTSL 2 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm6743-201ENSMUST00000117345 1066 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm12577-201ENSMUST00000119701 574 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm25277-201ENSMUST00000157266 324 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm18848-201ENSMUST00000182069 792 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm5300-201ENSMUST00000182201 1003 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm27014-201ENSMUST00000182658 937 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm4785-201ENSMUST00000191025 751 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC7.39□□□□□ -1.23
Hmgb1P63158 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm9604-201ENSMUST00000211175 433 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 AC123064.2-201ENSMUST00000217758 193 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.39□□□□□ -1.23
Hmgb1P63158 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Mir296-201ENSMUST00000083587 79 ntBASIC7.39□□□□□ -1.23
Hmgb1P63158 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
Hmgb1P63158 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
Hmgb1P63158 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC7.38□□□□□ -1.23
Hmgb1P63158 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC7.38□□□□□ -1.23
Hmgb1P63158 Gm44739-201ENSMUST00000205294 1426 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms