Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm3585-201ENSMUST00000173438 875 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC5.61□□□□□ -1.51
Sec61a1P61620 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm27186-201ENSMUST00000184223 307 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm7804-202ENSMUST00000194187 854 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm19030-201ENSMUST00000194947 552 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm37637-201ENSMUST00000195540 1256 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm5711-201ENSMUST00000197896 421 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm9367-201ENSMUST00000205703 546 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm45122-201ENSMUST00000206376 784 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm44690-201ENSMUST00000207984 382 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm7780-201ENSMUST00000214787 406 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 AC148328.2-201ENSMUST00000216960 262 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC5.61□□□□□ -1.51
Sec61a1P61620 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 AC131033.2-201ENSMUST00000228138 1011 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 AC156016.2-201ENSMUST00000228200 525 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sec61a1P61620 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Sec61a1P61620 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Sec61a1P61620 n-R5s95-201ENSMUST00000082684 118 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.61□□□□□ -1.51
Sec61a1P61620 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Trpm3-203ENSMUST00000087576 6740 ntAPPRIS P5 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Sec61a1P61620 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Psg20-202ENSMUST00000108482 1871 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 AC155234.1-201ENSMUST00000225610 2823 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Hephl1-201ENSMUST00000159985 5261 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm9239-201ENSMUST00000186942 2557 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm12713-201ENSMUST00000118404 764 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm15311-201ENSMUST00000119682 282 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm15305-201ENSMUST00000120354 288 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm12929-201ENSMUST00000122406 370 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Tmem132cos-202ENSMUST00000154361 699 ntTSL 3 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm27970-201ENSMUST00000184854 407 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm28846-201ENSMUST00000189161 368 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm35323-201ENSMUST00000191836 499 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm37439-201ENSMUST00000193150 856 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm17895-201ENSMUST00000194028 874 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.6□□□□□ -1.51
Sec61a1P61620 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm43867-201ENSMUST00000203860 525 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm44243-201ENSMUST00000204323 692 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm45078-201ENSMUST00000205343 546 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC5.6□□□□□ -1.51
Sec61a1P61620 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.6□□□□□ -1.51
Sec61a1P61620 AC163621.1-201ENSMUST00000220695 379 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC5.6□□□□□ -1.51
Sec61a1P61620 AC131743.3-201ENSMUST00000222099 662 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 AC107663.1-201ENSMUST00000224257 468 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 AC131997.2-201ENSMUST00000227452 362 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 AC132833.4-201ENSMUST00000228313 203 ntBASIC5.6□□□□□ -1.51
Sec61a1P61620 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC5.6□□□□□ -1.51
Sec61a1P61620 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Sec61a1P61620 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms