Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox3P53784 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.07□□□□□ -1.44
Sox3P53784 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox3P53784 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.07□□□□□ -1.44
Sox3P53784 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC6.07□□□□□ -1.44
Sox3P53784 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox3P53784 Gm46364-201ENSMUST00000218548 319 ntBASIC6.07□□□□□ -1.44
Sox3P53784 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.07□□□□□ -1.44
Sox3P53784 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.07□□□□□ -1.44
Sox3P53784 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.07□□□□□ -1.44
Sox3P53784 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox3P53784 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox3P53784 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox3P53784 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Sox3P53784 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Sox3P53784 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.07□□□□□ -1.44
Sox3P53784 Gm43410-201ENSMUST00000197510 2234 ntBASIC6.07□□□□□ -1.44
Sox3P53784 Cntnap3-201ENSMUST00000091554 6344 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.07□□□□□ -1.44
Sox3P53784 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Sox3P53784 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sox3P53784 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.06□□□□□ -1.44
Sox3P53784 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm42685-201ENSMUST00000200378 2390 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox3P53784 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Sox3P53784 Gm22372-201ENSMUST00000104589 136 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm14755-201ENSMUST00000118037 384 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm11498-201ENSMUST00000120660 949 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm11848-201ENSMUST00000121207 973 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm23250-201ENSMUST00000157444 267 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm24733-201ENSMUST00000158863 253 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm2539-203ENSMUST00000181352 746 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm27024-201ENSMUST00000182561 755 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm5244-202ENSMUST00000189517 743 ntBASIC6.06□□□□□ -1.44
Sox3P53784 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm37070-201ENSMUST00000193272 460 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.06□□□□□ -1.44
Sox3P53784 Gm43383-201ENSMUST00000195981 469 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sox3P53784 Gm19708-201ENSMUST00000199386 543 ntTSL 2 BASIC6.06□□□□□ -1.44
Sox3P53784 Gm18781-201ENSMUST00000211252 924 ntBASIC6.06□□□□□ -1.44
Sox3P53784 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 AC161586.1-201ENSMUST00000223232 547 ntBASIC6.06□□□□□ -1.44
Sox3P53784 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.06□□□□□ -1.44
Sox3P53784 AC139197.1-201ENSMUST00000228332 813 ntBASIC6.06□□□□□ -1.44
Sox3P53784 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm25587-201ENSMUST00000082498 166 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Mir134-201ENSMUST00000083492 71 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox3P53784 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox3P53784 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox3P53784 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC6.06□□□□□ -1.44
Sox3P53784 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sox3P53784 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC6.06□□□□□ -1.44
Sox3P53784 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 AC159244.3-201ENSMUST00000222887 3153 ntBASIC6.06□□□□□ -1.44
Sox3P53784 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.06□□□□□ -1.44
Sox3P53784 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sox3P53784 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.05□□□□□ -1.44
Sox3P53784 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox3P53784 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox3P53784 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
Sox3P53784 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms