Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx2-1P50220 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Nkx2-1P50220 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Nkx2-1P50220 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.19□□□□□ -1.58
Nkx2-1P50220 Trhr-201ENSMUST00000038856 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm43611-201ENSMUST00000196656 4352 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm25564-201ENSMUST00000104604 132 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm13732-201ENSMUST00000117753 535 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm15153-201ENSMUST00000119867 274 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm15316-201ENSMUST00000121082 421 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm14515-201ENSMUST00000121327 216 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm22533-201ENSMUST00000158821 274 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm23162-201ENSMUST00000175081 121 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Mir8114-201ENSMUST00000183582 111 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm28620-201ENSMUST00000190463 439 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm37380-201ENSMUST00000193752 397 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm36932-201ENSMUST00000195226 929 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm22897-202ENSMUST00000197782 127 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm44265-201ENSMUST00000203631 465 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm20136-201ENSMUST00000207501 891 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm19092-201ENSMUST00000209036 969 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm19169-201ENSMUST00000220109 1246 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm2099-201ENSMUST00000220979 412 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 AC106830.2-201ENSMUST00000226624 943 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.18□□□□□ -1.58
Nkx2-1P50220 Vmn2r22-201ENSMUST00000170808 2562 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.17□□□□□ -1.58
Nkx2-1P50220 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Gm23527-201ENSMUST00000104570 130 ntBASIC5.17□□□□□ -1.58
Nkx2-1P50220 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Gm14930-201ENSMUST00000118864 652 ntBASIC5.17□□□□□ -1.58
Nkx2-1P50220 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC5.17□□□□□ -1.58
Nkx2-1P50220 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx2-1P50220 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Gm22214-201ENSMUST00000157563 172 ntBASIC5.17□□□□□ -1.58
Nkx2-1P50220 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Nkx2-1P50220 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms