Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
Rfx1P48377 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Rfx1P48377 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm37056-201ENSMUST00000192141 1865 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm25167-201ENSMUST00000104188 120 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm17132-201ENSMUST00000109542 1158 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm14248-201ENSMUST00000117790 544 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm15739-201ENSMUST00000118049 872 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm6491-201ENSMUST00000118273 990 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm11558-201ENSMUST00000118454 459 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm12740-201ENSMUST00000118794 308 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm11708-201ENSMUST00000119530 832 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm8080-201ENSMUST00000122046 1155 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm24286-201ENSMUST00000157632 128 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm6650-201ENSMUST00000166710 614 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Rfx1P48377 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm27373-201ENSMUST00000184017 184 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Mir6357-201ENSMUST00000184246 104 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm29464-201ENSMUST00000187692 513 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm21728-201ENSMUST00000188442 695 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm21889-201ENSMUST00000188487 695 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm20932-201ENSMUST00000189115 694 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm21920-201ENSMUST00000190042 695 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm37152-201ENSMUST00000193369 1175 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm19057-201ENSMUST00000194329 1197 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm42472-201ENSMUST00000201626 859 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm7419-201ENSMUST00000209962 925 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm5948-201ENSMUST00000219627 839 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC8.18□□□□□ -1.1
Rfx1P48377 AC117949.1-201ENSMUST00000225547 419 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 AC140288.1-201ENSMUST00000226329 503 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 AC121114.1-201ENSMUST00000228522 570 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm5316-201ENSMUST00000050391 270 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm20900-201ENSMUST00000078729 472 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Rfx1P48377 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm3089-201ENSMUST00000200804 1395 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Gm3302-201ENSMUST00000201462 1395 ntBASIC8.18□□□□□ -1.1
Rfx1P48377 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Rfx1P48377 Gm10555-201ENSMUST00000193178 1791 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Rfx1P48377 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm45516-201ENSMUST00000211588 4182 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm1587-201ENSMUST00000100372 372 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm22660-201ENSMUST00000104193 130 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Rfx1P48377 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC8.17□□□□□ -1.1
Rfx1P48377 Gm23027-201ENSMUST00000158771 158 ntBASIC8.17□□□□□ -1.1
Rfx1P48377 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms