Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm28975-201ENSMUST00000186412 686 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm29519-201ENSMUST00000186994 398 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC7.39□□□□□ -1.23
Traf1P39428 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Gm29778-201ENSMUST00000201667 466 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC7.39□□□□□ -1.23
Traf1P39428 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Gm44809-201ENSMUST00000208305 993 ntBASIC7.39□□□□□ -1.23
Traf1P39428 AC159246.1-201ENSMUST00000214478 249 ntBASIC7.39□□□□□ -1.23
Traf1P39428 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 AC157085.1-201ENSMUST00000216343 162 ntBASIC7.39□□□□□ -1.23
Traf1P39428 AC158521.1-202ENSMUST00000224352 645 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Traf1P39428 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Traf1P39428 Gm28392-201ENSMUST00000077630 393 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm25133-201ENSMUST00000082647 130 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Vaultrc5-201ENSMUST00000083211 143 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Traf1P39428 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC7.39□□□□□ -1.23
Traf1P39428 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.39□□□□□ -1.23
Traf1P39428 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
Traf1P39428 AC131747.2-201ENSMUST00000226121 1895 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Traf1P39428 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.38□□□□□ -1.23
Traf1P39428 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Traf1P39428 Gm43719-201ENSMUST00000200088 2199 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm25795-201ENSMUST00000104421 132 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Snora35-201ENSMUST00000104579 128 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Traf1P39428 Gm15715-201ENSMUST00000118032 283 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC7.38□□□□□ -1.23
Traf1P39428 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.38□□□□□ -1.23
Traf1P39428 Gm24435-201ENSMUST00000157886 110 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm23259-201ENSMUST00000158318 303 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm20620-201ENSMUST00000177528 168 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm27005-201ENSMUST00000182783 921 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm37376-201ENSMUST00000192176 453 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm37901-201ENSMUST00000195107 514 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm8454-201ENSMUST00000196980 811 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Gm42799-201ENSMUST00000201331 328 ntBASIC7.38□□□□□ -1.23
Traf1P39428 BC049739-201ENSMUST00000202626 660 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.38□□□□□ -1.23
Traf1P39428 AC122188.1-201ENSMUST00000217534 312 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC7.38□□□□□ -1.23
Traf1P39428 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Gm5341-201ENSMUST00000058881 489 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gm44255-201ENSMUST00000203456 2053 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Traf1P39428 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Traf1P39428 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.38□□□□□ -1.23
Traf1P39428 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.38□□□□□ -1.23
Traf1P39428 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Traf1P39428 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC7.38□□□□□ -1.23
Traf1P39428 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Traf1P39428 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Traf1P39428 AC156636.2-201ENSMUST00000218845 4557 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Thap6-201ENSMUST00000191860 3151 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 AC159006.2-201ENSMUST00000228734 4144 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Traf1P39428 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Gm14513-201ENSMUST00000117403 123 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm14539-201ENSMUST00000117527 174 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm13835-201ENSMUST00000118459 685 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm26023-201ENSMUST00000122722 313 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Traf1P39428 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.37□□□□□ -1.23
Traf1P39428 Gm22701-201ENSMUST00000175371 291 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Mir5107-201ENSMUST00000175586 88 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm27653-201ENSMUST00000185037 136 ntBASIC7.37□□□□□ -1.23
Traf1P39428 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.37□□□□□ -1.23
Traf1P39428 Gm37770-201ENSMUST00000192855 772 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms