Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm24200-201ENSMUST00000082955 157 ntBASIC5.15□□□□□ -1.59
Col8a2P25318 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Col8a2P25318 Gm9519-201ENSMUST00000206108 1337 ntBASIC5.15□□□□□ -1.59
Col8a2P25318 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Col8a2P25318 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
Col8a2P25318 Vmn2r44-201ENSMUST00000166499 3660 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Col8a2P25318 Gm37925-201ENSMUST00000195352 4255 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
Col8a2P25318 AC139350.2-201ENSMUST00000226508 2331 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Col8a2P25318 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm20775-201ENSMUST00000100115 1851 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm7146-201ENSMUST00000116079 739 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 Gm11976-201ENSMUST00000119236 295 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 Gm12399-201ENSMUST00000121475 446 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Wfdc15b-203ENSMUST00000164567 497 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Col8a2P25318 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm3351-201ENSMUST00000193454 505 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.14□□□□□ -1.59
Col8a2P25318 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 Gm22300-201ENSMUST00000082661 126 ntBASIC5.14□□□□□ -1.59
Col8a2P25318 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Col8a2P25318 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
Col8a2P25318 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Col8a2P25318 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm10826-201ENSMUST00000215366 3304 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Col8a2P25318 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Ighv1-39-201ENSMUST00000103515 351 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Col8a2P25318 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm12874-201ENSMUST00000117190 913 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm14331-201ENSMUST00000120396 409 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm13740-201ENSMUST00000120590 310 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm8215-201ENSMUST00000120627 990 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm22518-201ENSMUST00000158267 68 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm17149-201ENSMUST00000164712 375 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm28195-201ENSMUST00000186992 372 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm37774-201ENSMUST00000194401 245 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm42205-201ENSMUST00000199244 804 ntTSL 3 BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a2P25318 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.13□□□□□ -1.59
Col8a2P25318 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.13□□□□□ -1.59
Col8a2P25318 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC5.13□□□□□ -1.59
Col8a2P25318 AC153936.1-201ENSMUST00000219874 395 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Gm9292-201ENSMUST00000222008 710 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 AC159205.4-201ENSMUST00000225964 704 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 AC154634.2-201ENSMUST00000225983 1184 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 AC120375.2-202ENSMUST00000228722 397 ntBASIC5.13□□□□□ -1.59
Col8a2P25318 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Col8a2P25318 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms