Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm24738-201ENSMUST00000158856 123 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm16132-201ENSMUST00000159296 598 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sdc1P18828 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm3760-201ENSMUST00000167475 804 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm4308-201ENSMUST00000179735 914 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm7713-201ENSMUST00000181201 1007 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sdc1P18828 1700066B17Rik-202ENSMUST00000187091 675 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm28620-201ENSMUST00000190463 439 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm38373-201ENSMUST00000192042 288 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm38177-201ENSMUST00000192213 1040 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm42431-201ENSMUST00000196880 323 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm43387-201ENSMUST00000196896 1066 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 AC137678.1-201ENSMUST00000198370 118 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Zfp799-203ENSMUST00000201876 632 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc1P18828 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc1P18828 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 AC153864.1-201ENSMUST00000218482 523 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm19186-201ENSMUST00000219922 333 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 AC118006.3-201ENSMUST00000223948 1176 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 AC122035.2-201ENSMUST00000228698 462 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Sdc1P18828 n-R5s29-201ENSMUST00000082836 119 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm10247-201ENSMUST00000090395 333 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm42798-201ENSMUST00000200853 3972 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm9839-201ENSMUST00000195252 1437 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm42725-201ENSMUST00000199296 4193 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sdc1P18828 Slc38a4-201ENSMUST00000023101 3932 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm25379-201ENSMUST00000104338 114 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm24989-201ENSMUST00000104461 88 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm24519-201ENSMUST00000104507 132 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Mrps23-202ENSMUST00000107915 332 ntTSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm12072-201ENSMUST00000118293 715 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm14563-201ENSMUST00000120571 354 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm15362-201ENSMUST00000121459 388 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm11203-201ENSMUST00000122169 741 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm4764-201ENSMUST00000130207 1233 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm24782-201ENSMUST00000157641 132 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm5456-201ENSMUST00000170706 844 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm17045-201ENSMUST00000178600 844 ntBASIC4.97□□□□□ -1.61
Sdc1P18828 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Sdc1P18828 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Sdc1P18828 Gm3605-201ENSMUST00000185858 440 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms