Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm28819-206ENSMUST00000188816 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29079-201ENSMUST00000188875 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28213-201ENSMUST00000189183 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28952-201ENSMUST00000189285 681 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29382-201ENSMUST00000189549 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29377-205ENSMUST00000189603 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28327-201ENSMUST00000189638 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28790-201ENSMUST00000189642 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28907-201ENSMUST00000189700 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29586-207ENSMUST00000189745 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29115-201ENSMUST00000189870 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28366-201ENSMUST00000190147 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29212-201ENSMUST00000190384 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29533-201ENSMUST00000190403 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28162-201ENSMUST00000190545 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29030-201ENSMUST00000190848 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28742-201ENSMUST00000191001 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm19124-201ENSMUST00000191041 832 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28899-201ENSMUST00000191161 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29567-201ENSMUST00000191188 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28222-201ENSMUST00000191210 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28776-201ENSMUST00000191282 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29306-201ENSMUST00000191366 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29618-201ENSMUST00000191423 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28136-210ENSMUST00000191432 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm29251-201ENSMUST00000191480 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm28658-201ENSMUST00000191532 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm32180-201ENSMUST00000192415 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm30598-201ENSMUST00000192620 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm18752-201ENSMUST00000192876 608 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.28□□□□□ -1.4
Lire1P11260 Gm37627-201ENSMUST00000194585 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm34274-201ENSMUST00000195825 615 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm17822-201ENSMUST00000204307 351 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm20997-201ENSMUST00000205148 231 ntBASIC6.28□□□□□ -1.4
Lire1P11260 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 Gm7351-201ENSMUST00000210745 580 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 Gm10126-201ENSMUST00000221732 168 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm33312-201ENSMUST00000222443 332 ntBASIC6.28□□□□□ -1.4
Lire1P11260 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Gm2840-201ENSMUST00000048361 411 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Serpinb9d-201ENSMUST00000067198 1250 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lire1P11260 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lire1P11260 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lire1P11260 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Lire1P11260 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Lire1P11260 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
Lire1P11260 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm45322-201ENSMUST00000211642 1361 ntBASIC6.28□□□□□ -1.4
Lire1P11260 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 Gm44535-201ENSMUST00000208889 3136 ntBASIC6.28□□□□□ -1.4
Lire1P11260 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Lire1P11260 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 Fam26d-202ENSMUST00000218239 3075 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Lire1P11260 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Lire1P11260 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 Gm16073-201ENSMUST00000116032 517 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm15531-201ENSMUST00000118062 252 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm8812-201ENSMUST00000118496 412 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm13924-201ENSMUST00000119899 486 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm16420-201ENSMUST00000120258 856 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm13642-201ENSMUST00000121697 381 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm15534-201ENSMUST00000137642 562 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.27□□□□□ -1.41
Lire1P11260 Gm10364-202ENSMUST00000153034 1001 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm25669-201ENSMUST00000157699 112 ntBASIC6.27□□□□□ -1.41
Lire1P11260 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 Gm7426-201ENSMUST00000179046 404 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm21304-201ENSMUST00000180568 1185 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Lire1P11260 Gm21293-202ENSMUST00000180664 1185 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Lire1P11260 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
Lire1P11260 Gm21312-203ENSMUST00000181239 1185 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
Lire1P11260 Gm20765-203ENSMUST00000181707 1185 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
Lire1P11260 Gm5272-201ENSMUST00000182730 982 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Mir6244-201ENSMUST00000184156 117 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Lire1P11260 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.27□□□□□ -1.41
Lire1P11260 Gm38022-201ENSMUST00000191762 403 ntBASIC6.27□□□□□ -1.41
Lire1P11260 Gm37375-201ENSMUST00000193859 387 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms