Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm37943-201ENSMUST00000194053 3944 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm22781-201ENSMUST00000104083 137 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm26419-201ENSMUST00000104272 133 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm25724-201ENSMUST00000104531 117 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm12073-201ENSMUST00000117382 524 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm11462-201ENSMUST00000117749 562 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm13462-201ENSMUST00000121472 961 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm11910-201ENSMUST00000121624 432 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.19□□□□□ -1.42
Hcn3O88705 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm8323-201ENSMUST00000168436 1201 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm3242-201ENSMUST00000171273 485 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm4904-201ENSMUST00000178243 1195 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm2871-201ENSMUST00000179984 1204 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm27156-201ENSMUST00000184589 754 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm37871-201ENSMUST00000194973 688 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm36932-201ENSMUST00000195226 929 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm22711-202ENSMUST00000197029 135 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm4525-201ENSMUST00000198831 254 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm44003-201ENSMUST00000203024 490 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm43974-201ENSMUST00000205080 684 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm45247-201ENSMUST00000210757 309 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm45725-201ENSMUST00000212962 337 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm5655-201ENSMUST00000221078 901 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.19□□□□□ -1.42
Hcn3O88705 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 AC131117.2-202ENSMUST00000224539 547 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 AC154184.2-201ENSMUST00000225335 349 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hcn3O88705 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hcn3O88705 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Hcn3O88705 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Gm18701-201ENSMUST00000188281 1536 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.19□□□□□ -1.42
Hcn3O88705 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Hcn3O88705 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Hcn3O88705 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Hcn3O88705 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hcn3O88705 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Hcn3O88705 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC6.18□□□□□ -1.42
Hcn3O88705 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.18□□□□□ -1.42
Hcn3O88705 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Hcn3O88705 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Mat2a-202ENSMUST00000205335 3387 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Hcn3O88705 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Hcn3O88705 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Hcn3O88705 Gm15018-201ENSMUST00000117090 633 ntBASIC6.18□□□□□ -1.42
Hcn3O88705 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.18□□□□□ -1.42
Hcn3O88705 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.18□□□□□ -1.42
Hcn3O88705 Gm11903-201ENSMUST00000118958 727 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms