Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm23620-201ENSMUST00000116812 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm25042-201ENSMUST00000116856 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm25540-201ENSMUST00000116880 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm15016-201ENSMUST00000117300 720 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm12181-201ENSMUST00000121448 531 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm24687-201ENSMUST00000157758 241 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm23259-201ENSMUST00000158318 303 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm23207-201ENSMUST00000158665 102 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm23550-201ENSMUST00000179003 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm25123-201ENSMUST00000179154 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm25353-201ENSMUST00000179366 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm22992-201ENSMUST00000179496 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm25892-201ENSMUST00000179867 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm24092-201ENSMUST00000180257 121 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm21542-201ENSMUST00000182307 993 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm27210-201ENSMUST00000184263 402 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm29519-201ENSMUST00000186994 398 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm28196-201ENSMUST00000187719 640 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm44571-201ENSMUST00000208092 533 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm7499-201ENSMUST00000210423 813 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 AC135353.1-201ENSMUST00000215330 630 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.32□□□□□ -1.4
Srp54bE9PXC0 4921501I09Rik-201ENSMUST00000220337 384 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gml2-201ENSMUST00000096399 808 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Nlrp1c-ps-201ENSMUST00000171546 3457 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Srp54bE9PXC0 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm16325-201ENSMUST00000141199 3174 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Trappc13-203ENSMUST00000141557 3502 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm25795-201ENSMUST00000104421 132 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm4911-201ENSMUST00000119388 945 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm14300-201ENSMUST00000120800 946 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm27512-201ENSMUST00000175328 126 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm28186-201ENSMUST00000187447 679 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm28443-201ENSMUST00000189081 698 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm37604-201ENSMUST00000191749 1272 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm37430-201ENSMUST00000193039 196 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm7343-201ENSMUST00000194510 1061 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm17824-201ENSMUST00000197690 805 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 AC154806.5-205ENSMUST00000228828 411 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Olfr350-201ENSMUST00000055130 939 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Papolg-201ENSMUST00000020513 3747 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Olfr1366-203ENSMUST00000205976 3112 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.31□□□□□ -1.4
Srp54bE9PXC0 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.31□□□□□ -1.4
Srp54bE9PXC0 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.3□□□□□ -1.4
Srp54bE9PXC0 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.3□□□□□ -1.4
Srp54bE9PXC0 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms