Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Col4a6B1AVK5 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm11737-201ENSMUST00000118713 468 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm18343-201ENSMUST00000172802 604 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 9530026P05Rik-202ENSMUST00000181145 2968 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm8826-201ENSMUST00000193161 948 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm44184-201ENSMUST00000204290 132 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm7890-201ENSMUST00000204877 601 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm44837-201ENSMUST00000206863 717 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm32817-201ENSMUST00000210007 689 ntTSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm37686-201ENSMUST00000194099 2309 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Celf2-206ENSMUST00000114934 5470 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm24886-201ENSMUST00000104384 123 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm12482-201ENSMUST00000120435 630 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm11894-201ENSMUST00000121579 328 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm37681-201ENSMUST00000193880 727 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm44219-201ENSMUST00000203005 273 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm18325-201ENSMUST00000203228 835 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm44604-201ENSMUST00000205475 496 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 AC122858.1-201ENSMUST00000226212 433 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 AC122858.3-201ENSMUST00000226341 740 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 AC122858.1-202ENSMUST00000228290 986 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Col4a6B1AVK5 AC161884.1-201ENSMUST00000225436 2174 ntBASIC6.39□□□□□ -1.39
Col4a6B1AVK5 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm19093-201ENSMUST00000210671 1454 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm12494-201ENSMUST00000121684 521 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm12685-201ENSMUST00000121702 214 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm29596-201ENSMUST00000185710 385 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm18996-201ENSMUST00000214851 755 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm46192-201ENSMUST00000217894 326 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm6068-201ENSMUST00000222270 387 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm7768-201ENSMUST00000222988 597 ntBASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Col4a6B1AVK5 Gm2531-201ENSMUST00000075609 512 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms