Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Upk3aQ9JKX8 Obox7-201ENSMUST00000069740 1306 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm9314-201ENSMUST00000199881 1528 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 AC154612.1-202ENSMUST00000224806 1725 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Vmn1r15-201ENSMUST00000228297 2021 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm13811-201ENSMUST00000117800 256 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm14331-201ENSMUST00000120396 409 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm12396-201ENSMUST00000121600 306 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm15642-201ENSMUST00000148057 311 ntTSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm5125-201ENSMUST00000148614 624 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm22223-201ENSMUST00000157360 125 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm16102-201ENSMUST00000160955 420 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm37604-201ENSMUST00000191749 1272 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm43436-201ENSMUST00000199308 147 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 AC154219.1-201ENSMUST00000220764 1262 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm3785-201ENSMUST00000221000 202 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 AC129219.1-201ENSMUST00000224336 448 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm22581-201ENSMUST00000083735 136 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Gm42705-201ENSMUST00000200176 2465 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Upk3aQ9JKX8 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm12643-201ENSMUST00000116078 374 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm14510-201ENSMUST00000116165 1092 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm14606-201ENSMUST00000117078 1155 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm12152-201ENSMUST00000122465 684 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 n-R5s209-201ENSMUST00000179494 119 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm37189-201ENSMUST00000192131 298 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 Gm5318-201ENSMUST00000205249 406 ntBASIC5.98□□□□□ -1.45
Upk3aQ9JKX8 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 76 ms