Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm5871-201ENSMUST00000176461 718 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm27005-201ENSMUST00000182783 921 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm27193-201ENSMUST00000184217 586 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Mir6362-201ENSMUST00000184329 107 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm37439-201ENSMUST00000193150 856 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm43063-201ENSMUST00000198198 1081 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Sult2a7-204ENSMUST00000211740 942 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm9048-201ENSMUST00000177744 2409 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm9040-201ENSMUST00000177762 2409 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm9044-201ENSMUST00000179851 2409 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Gm9046-201ENSMUST00000218329 2409 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Lima1Q9ERG0 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Lima1Q9ERG0 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Lima1Q9ERG0 Gm15328-201ENSMUST00000144006 2977 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Lima1Q9ERG0 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
Lima1Q9ERG0 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm13455-201ENSMUST00000118767 517 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm7700-201ENSMUST00000120273 970 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm26037-201ENSMUST00000158150 311 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm3140-201ENSMUST00000163523 481 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Mir3473e-201ENSMUST00000183932 110 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm27804-201ENSMUST00000185135 119 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm37126-201ENSMUST00000195289 883 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm8479-201ENSMUST00000203825 718 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 AC153936.1-201ENSMUST00000219874 395 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 AC158750.1-201ENSMUST00000226163 634 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm6419-201ENSMUST00000097166 429 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm37911-201ENSMUST00000193099 1545 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 C730027H18Rik-202ENSMUST00000219822 3268 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm20276-201ENSMUST00000216122 2648 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Lima1Q9ERG0 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Lima1Q9ERG0 Gm37894-201ENSMUST00000195416 2599 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms