Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
U2af1Q9D883 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.24□□□□□ -1.09
U2af1Q9D883 Fam227b-202ENSMUST00000110448 1693 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
U2af1Q9D883 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.24□□□□□ -1.09
U2af1Q9D883 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC8.23□□□□□ -1.09
U2af1Q9D883 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm22952-201ENSMUST00000116720 120 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm14755-201ENSMUST00000118037 384 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm22235-201ENSMUST00000157085 110 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm16269-201ENSMUST00000160532 409 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC8.23□□□□□ -1.09
U2af1Q9D883 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm21542-201ENSMUST00000182307 993 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm27602-201ENSMUST00000183861 111 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
U2af1Q9D883 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm37475-201ENSMUST00000193107 1015 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm8860-201ENSMUST00000193160 445 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm37463-201ENSMUST00000193819 796 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC8.23□□□□□ -1.09
U2af1Q9D883 CT868720.2-201ENSMUST00000221207 413 ntTSL 3 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Cma2-202ENSMUST00000228263 857 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm8256-203ENSMUST00000228692 591 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
U2af1Q9D883 Gm44068-201ENSMUST00000204049 2128 ntBASIC8.23□□□□□ -1.09
U2af1Q9D883 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
U2af1Q9D883 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Emcn-202ENSMUST00000122064 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm44229-201ENSMUST00000203211 2487 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm28527-201ENSMUST00000185210 297 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm18799-201ENSMUST00000189104 913 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm28996-201ENSMUST00000190316 721 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm9293-201ENSMUST00000223096 306 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm19368-201ENSMUST00000221258 4424 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
U2af1Q9D883 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.22□□□□□ -1.09
U2af1Q9D883 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
U2af1Q9D883 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Pde4b-204ENSMUST00000106901 2129 ntTSL 2 BASIC8.21□□□□□ -1.09
U2af1Q9D883 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Gm43707-201ENSMUST00000196451 3187 ntBASIC8.21□□□□□ -1.09
U2af1Q9D883 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Gm37730-201ENSMUST00000192432 2211 ntBASIC8.21□□□□□ -1.09
U2af1Q9D883 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
U2af1Q9D883 Gm25795-201ENSMUST00000104421 132 ntBASIC8.21□□□□□ -1.1
U2af1Q9D883 Gm12399-201ENSMUST00000121475 446 ntBASIC8.21□□□□□ -1.1
U2af1Q9D883 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC8.21□□□□□ -1.1
U2af1Q9D883 Gm23896-201ENSMUST00000158109 130 ntBASIC8.21□□□□□ -1.1
U2af1Q9D883 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.21□□□□□ -1.1
U2af1Q9D883 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.21□□□□□ -1.1
U2af1Q9D883 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.21□□□□□ -1.1
U2af1Q9D883 Gm22132-201ENSMUST00000175316 100 ntBASIC8.21□□□□□ -1.1
U2af1Q9D883 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms