Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm24888-201ENSMUST00000104387 130 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm12244-201ENSMUST00000119500 291 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm12307-201ENSMUST00000120581 590 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm12438-201ENSMUST00000122034 336 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Tmem27-201ENSMUST00000015545 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm25722-201ENSMUST00000157498 279 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm28149-201ENSMUST00000187102 378 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm28768-201ENSMUST00000189034 378 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm44225-201ENSMUST00000203582 186 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm44705-201ENSMUST00000206719 339 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm4083-201ENSMUST00000207158 451 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm44911-201ENSMUST00000208436 1062 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm45064-201ENSMUST00000208619 443 ntTSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 AC104906.1-201ENSMUST00000218122 913 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 CT009556.1-201ENSMUST00000227282 449 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Vmn1r41-205ENSMUST00000227630 827 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm23238-201ENSMUST00000083007 164 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm43425-201ENSMUST00000201793 3291 ntBASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Smc1aQ9CU62 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Mrpl1-201ENSMUST00000036437 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm18757-201ENSMUST00000207938 3141 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm11498-201ENSMUST00000120660 949 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm27653-201ENSMUST00000185037 136 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm34768-201ENSMUST00000193884 565 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm44091-201ENSMUST00000205212 649 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm45196-201ENSMUST00000206751 825 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 AC154219.1-201ENSMUST00000220764 1262 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 AC131029.2-201ENSMUST00000226696 628 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm21731-201ENSMUST00000079524 489 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm37076-201ENSMUST00000192033 2294 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm8401-201ENSMUST00000120248 1739 ntBASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Smc1aQ9CU62 Homer1-203ENSMUST00000080127 3052 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
Smc1aQ9CU62 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC7.09□□□□□ -1.28
Smc1aQ9CU62 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC7.09□□□□□ -1.28
Smc1aQ9CU62 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.28
Smc1aQ9CU62 Pkn2-206ENSMUST00000173830 2808 ntTSL 5 BASIC7.09□□□□□ -1.28
Smc1aQ9CU62 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Smc1aQ9CU62 AC155710.1-201ENSMUST00000219913 1353 ntBASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms