Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Gm15229-201ENSMUST00000146636 1398 ntBASIC7.66□□□□□ -1.18
Clp1Q99LI9 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 AC130831.1-201ENSMUST00000224546 1474 ntBASIC7.66□□□□□ -1.18
Clp1Q99LI9 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.66□□□□□ -1.18
Clp1Q99LI9 Klhl5-205ENSMUST00000204348 3380 ntTSL 5 BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Gm37056-201ENSMUST00000192141 1865 ntBASIC7.66□□□□□ -1.18
Clp1Q99LI9 Crnn-203ENSMUST00000195515 1863 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Clp1Q99LI9 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 AC158605.4-201ENSMUST00000219013 3361 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Atp6v0a1-202ENSMUST00000092663 3813 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm14772-201ENSMUST00000116562 514 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm9085-201ENSMUST00000119994 1072 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm12734-201ENSMUST00000120228 948 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm15877-201ENSMUST00000121897 964 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm12754-201ENSMUST00000121908 454 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm12317-201ENSMUST00000122307 319 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm16276-201ENSMUST00000131218 262 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm25979-201ENSMUST00000157177 138 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm8032-201ENSMUST00000171009 574 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm412-201ENSMUST00000193360 948 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm37936-201ENSMUST00000194647 1322 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm43384-201ENSMUST00000200569 637 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm43810-201ENSMUST00000201018 232 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 AL772265.1-201ENSMUST00000214379 305 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gm4052-201ENSMUST00000220890 451 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 AC129935.1-201ENSMUST00000226302 873 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Cma2-202ENSMUST00000228263 857 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 AC129208.2-201ENSMUST00000228506 320 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Mir106b-201ENSMUST00000083580 82 ntBASIC7.65□□□□□ -1.18
Clp1Q99LI9 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Clp1Q99LI9 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
Clp1Q99LI9 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.19
Clp1Q99LI9 AC159809.2-202ENSMUST00000214073 3333 ntTSL 5 BASIC7.65□□□□□ -1.19
Clp1Q99LI9 Btbd18-201ENSMUST00000133437 3052 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.19
Clp1Q99LI9 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC7.65□□□□□ -1.19
Clp1Q99LI9 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm38315-201ENSMUST00000194286 2437 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Ephx2-202ENSMUST00000224698 1985 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Mapk8-203ENSMUST00000111943 1310 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 AC166574.1-201ENSMUST00000226916 1309 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
Clp1Q99LI9 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm15209-201ENSMUST00000117703 400 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm15854-201ENSMUST00000118879 808 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm11445-201ENSMUST00000119101 532 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm15193-201ENSMUST00000120224 865 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm11404-201ENSMUST00000120872 494 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm11472-201ENSMUST00000121305 556 ntBASIC7.64□□□□□ -1.19
Clp1Q99LI9 Gm14092-201ENSMUST00000136794 617 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms