Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm14445-201ENSMUST00000117051 1484 ntBASIC8.42□□□□□ -1.06
RtcbQ99LF4 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.42□□□□□ -1.06
RtcbQ99LF4 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
RtcbQ99LF4 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm43880-201ENSMUST00000203635 2162 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm43258-201ENSMUST00000200312 1950 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm16007-201ENSMUST00000117837 286 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm12262-201ENSMUST00000119915 305 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm12444-201ENSMUST00000121512 877 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm12630-201ENSMUST00000121575 784 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Mir1960-201ENSMUST00000157488 78 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm27512-201ENSMUST00000175328 126 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Mir7037-201ENSMUST00000184414 65 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm18611-201ENSMUST00000200334 1118 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm44770-201ENSMUST00000205395 1264 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm18537-201ENSMUST00000205709 989 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 AC161252.1-201ENSMUST00000225536 467 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.41□□□□□ -1.06
RtcbQ99LF4 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
RtcbQ99LF4 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Erbin-203ENSMUST00000091269 6224 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm42455-201ENSMUST00000199761 2736 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm19325-201ENSMUST00000186238 3382 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Pde10a-206ENSMUST00000115720 3328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm3555-201ENSMUST00000160287 1395 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 AC134860.3-201ENSMUST00000223564 1300 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Tek-203ENSMUST00000102798 4654 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm26422-201ENSMUST00000104276 132 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm15077-201ENSMUST00000122344 362 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm16248-201ENSMUST00000124238 243 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm16260-201ENSMUST00000155141 304 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm27854-201ENSMUST00000175578 244 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm18415-201ENSMUST00000177464 647 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC8.4□□□□□ -1.06
RtcbQ99LF4 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm37430-201ENSMUST00000193039 196 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm6366-201ENSMUST00000198766 826 ntBASIC8.4□□□□□ -1.06
RtcbQ99LF4 Gm18597-201ENSMUST00000209519 694 ntBASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms