Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 AC141476.1-201ENSMUST00000224988 3387 ntBASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Sphkap-205ENSMUST00000160953 8154 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Sf3a1Q8K4Z5 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm42676-201ENSMUST00000197609 2686 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm7048-201ENSMUST00000199395 1891 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12140-201ENSMUST00000121214 544 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12369-201ENSMUST00000121343 942 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm11787-201ENSMUST00000121996 1050 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm16260-201ENSMUST00000155141 304 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm25487-201ENSMUST00000158725 125 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm23343-201ENSMUST00000158964 143 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm4152-201ENSMUST00000172675 259 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm22548-201ENSMUST00000174899 78 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm19124-201ENSMUST00000191041 832 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37770-201ENSMUST00000192855 772 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm18805-201ENSMUST00000206872 655 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 CT009764.1-201ENSMUST00000222260 483 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 AC154562.1-201ENSMUST00000226140 966 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 AC164597.1-201ENSMUST00000226538 514 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 AC123533.2-201ENSMUST00000228176 375 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Olfr1079-201ENSMUST00000099882 948 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm42989-201ENSMUST00000200646 2306 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.79□□□□□ -1.16
Sf3a1Q8K4Z5 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 BC055308-201ENSMUST00000193380 2538 ntBASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm37183-201ENSMUST00000191712 3405 ntBASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12565-201ENSMUST00000119004 649 ntBASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm42824-201ENSMUST00000199361 247 ntBASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm43772-201ENSMUST00000202052 379 ntBASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm44861-201ENSMUST00000208325 1220 ntBASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Sf3a1Q8K4Z5 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms