Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim9Q8C7M3 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.95□□□□□ -1.3
Trim9Q8C7M3 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.95□□□□□ -1.3
Trim9Q8C7M3 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trim9Q8C7M3 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC6.95□□□□□ -1.3
Trim9Q8C7M3 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim9Q8C7M3 Gm43503-201ENSMUST00000200033 3408 ntBASIC6.95□□□□□ -1.3
Trim9Q8C7M3 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trim9Q8C7M3 Gm38263-201ENSMUST00000195879 3059 ntBASIC6.95□□□□□ -1.3
Trim9Q8C7M3 AC144772.2-201ENSMUST00000228830 2859 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm26143-201ENSMUST00000104480 108 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 n-R5s172-201ENSMUST00000104508 114 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm11833-201ENSMUST00000118393 853 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm12375-201ENSMUST00000119331 921 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm12399-201ENSMUST00000121475 446 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm6918-201ENSMUST00000167622 1222 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Mir7685-201ENSMUST00000183555 62 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Mir6921-201ENSMUST00000183719 80 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Ly6c2-203ENSMUST00000188214 638 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm38030-201ENSMUST00000192376 475 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm44243-201ENSMUST00000204323 692 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm45054-201ENSMUST00000206525 342 ntTSL 2 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm4548-201ENSMUST00000208487 509 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 AC117797.1-201ENSMUST00000223977 695 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Mfap3-201ENSMUST00000020830 4839 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm13219-203ENSMUST00000154223 1843 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.94□□□□□ -1.3
Trim9Q8C7M3 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm44697-201ENSMUST00000207756 1679 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm26786-201ENSMUST00000180410 6243 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm24048-201ENSMUST00000102411 106 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm14606-201ENSMUST00000117078 1155 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm7058-201ENSMUST00000119209 902 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm14098-201ENSMUST00000119295 623 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm15967-201ENSMUST00000120027 1116 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm11472-201ENSMUST00000121305 556 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm25295-201ENSMUST00000122794 306 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm12504-202ENSMUST00000148026 306 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm11107-201ENSMUST00000165414 505 ntBASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm3269-202ENSMUST00000178137 618 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Trim9Q8C7M3 Gm3594-203ENSMUST00000179747 618 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 110.8 ms