Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm4764-201ENSMUST00000130207 1233 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm25013-201ENSMUST00000158402 128 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm25246-201ENSMUST00000175476 69 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm29201-201ENSMUST00000189120 431 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm6693-201ENSMUST00000189583 813 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 AC157822.1-201ENSMUST00000196643 80 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 CT009515.3-201ENSMUST00000226509 671 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Sntg1-204ENSMUST00000132064 4165 ntTSL 5 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm37951-201ENSMUST00000192963 3032 ntBASIC8.74□□□□□ -1.01
Usp47Q8BY87 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Usp47Q8BY87 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm22372-201ENSMUST00000104589 136 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm15194-201ENSMUST00000120453 434 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm22599-201ENSMUST00000157597 132 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm27004-201ENSMUST00000183300 727 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm5692-201ENSMUST00000187254 1057 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm43222-201ENSMUST00000199013 603 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm36262-201ENSMUST00000223274 499 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 AC166574.7-201ENSMUST00000228502 704 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 AC163664.2-201ENSMUST00000228894 459 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 AC139758.3-201ENSMUST00000226853 2704 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm44697-201ENSMUST00000207756 1679 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Clcn3-202ENSMUST00000056508 5684 ntAPPRIS P4 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 AC022682.2-202ENSMUST00000224394 3943 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Gm5430-201ENSMUST00000182525 915 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 AC122393.2-201ENSMUST00000226404 1093 ntBASIC8.73□□□□□ -1.01
Usp47Q8BY87 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Usp47Q8BY87 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm42607-201ENSMUST00000200221 3393 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm42975-201ENSMUST00000200612 1491 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm2223-201ENSMUST00000112099 1350 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm9930-201ENSMUST00000066742 3151 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm13430-201ENSMUST00000121366 288 ntBASIC8.72□□□□□ -1.01
Usp47Q8BY87 B230118H07Rik-209ENSMUST00000160722 931 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC8.72□□□□□ -1.01
Usp47Q8BY87 Mir6362-201ENSMUST00000184329 107 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms