Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Gm43148-201ENSMUST00000198237 520 ntBASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Igkv4-56-201ENSMUST00000198436 349 ntBASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 AC153937.2-201ENSMUST00000218485 632 ntTSL 5 BASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Gm7768-201ENSMUST00000222988 597 ntBASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 AC164302.1-201ENSMUST00000227036 433 ntBASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 AC166369.2-201ENSMUST00000228403 308 ntBASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Gm11516-201ENSMUST00000118450 1582 ntBASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Col16a1Q8BLX7 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm43343-201ENSMUST00000202454 1926 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 AC122881.1-201ENSMUST00000225757 2695 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 AC138765.2-202ENSMUST00000228418 3435 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm26078-201ENSMUST00000104067 128 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm23485-201ENSMUST00000104181 155 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm25415-201ENSMUST00000104220 132 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm13579-201ENSMUST00000118519 517 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm12494-201ENSMUST00000121684 521 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm26489-201ENSMUST00000157880 264 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm24216-201ENSMUST00000158259 117 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm16112-201ENSMUST00000159075 382 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm44184-201ENSMUST00000204290 132 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm4032-201ENSMUST00000210886 487 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 AL603745.1-201ENSMUST00000215473 532 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 AC164107.1-202ENSMUST00000228953 1816 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 AC165080.3-201ENSMUST00000217162 3116 ntBASIC8.12□□□□□ -1.11
Col16a1Q8BLX7 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 AC174459.1-201ENSMUST00000224476 1943 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Lipe-203ENSMUST00000105177 1251 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm22959-201ENSMUST00000122514 303 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm22492-201ENSMUST00000157192 297 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Mir7006-201ENSMUST00000183624 69 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm28061-201ENSMUST00000189085 807 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm44219-201ENSMUST00000203005 273 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm18325-201ENSMUST00000203228 835 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 CT030175.1-201ENSMUST00000220822 408 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 AC156802.1-201ENSMUST00000223623 579 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 n-R5s180-201ENSMUST00000082770 106 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm23502-201ENSMUST00000083902 145 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 C87436-203ENSMUST00000113700 2523 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC8.11□□□□□ -1.11
Col16a1Q8BLX7 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Mir678-201ENSMUST00000102114 84 ntBASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Gm24236-201ENSMUST00000157794 134 ntBASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Mir3080-201ENSMUST00000175010 79 ntBASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Gm29650-201ENSMUST00000188485 742 ntBASIC8.1□□□□□ -1.11
Col16a1Q8BLX7 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms