Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm16170-201ENSMUST00000156882 3754 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm10723-201ENSMUST00000195366 6918 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm25396-201ENSMUST00000103981 133 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm13455-201ENSMUST00000118767 517 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm7599-201ENSMUST00000121453 796 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm26509-201ENSMUST00000180947 948 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm27804-201ENSMUST00000185135 119 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm17824-201ENSMUST00000197690 805 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm6070-201ENSMUST00000207275 419 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Olfr291-201ENSMUST00000211582 1159 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm7769-201ENSMUST00000212900 933 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm26063-201ENSMUST00000083378 107 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm24411-201ENSMUST00000083428 131 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm43788-201ENSMUST00000201539 2417 ntBASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Chmp2bQ8BJF9 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm43485-201ENSMUST00000199292 1710 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm23527-201ENSMUST00000104570 130 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm22103-201ENSMUST00000116733 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm26475-201ENSMUST00000116769 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm23620-201ENSMUST00000116812 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm25042-201ENSMUST00000116856 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm25540-201ENSMUST00000116880 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm15901-201ENSMUST00000117663 941 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm14791-201ENSMUST00000119061 1166 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm15153-201ENSMUST00000119867 274 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Mir1903-201ENSMUST00000122574 80 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm22604-201ENSMUST00000157604 311 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm26167-201ENSMUST00000158423 253 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm5283-201ENSMUST00000177874 334 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm23550-201ENSMUST00000179003 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm25123-201ENSMUST00000179154 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm25353-201ENSMUST00000179366 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm22992-201ENSMUST00000179496 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm25617-201ENSMUST00000179548 133 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm25892-201ENSMUST00000179867 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm24092-201ENSMUST00000180257 121 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm27005-201ENSMUST00000182783 921 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm27617-201ENSMUST00000184321 168 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm43576-201ENSMUST00000197937 871 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm25617-202ENSMUST00000198387 132 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm45343-201ENSMUST00000210452 828 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 Gm19340-201ENSMUST00000221995 345 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 AC107663.1-201ENSMUST00000224257 468 ntBASIC6.36□□□□□ -1.39
Chmp2bQ8BJF9 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms