Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm37548-201ENSMUST00000194519 3814 ntBASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC7.39□□□□□ -1.23
Ddx55Q6ZPL9 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Cd160-202ENSMUST00000107074 2590 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm42507-201ENSMUST00000201187 2555 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm42535-201ENSMUST00000197312 1399 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm22952-201ENSMUST00000116720 120 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm11852-201ENSMUST00000120806 222 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 n-R5s19-201ENSMUST00000122793 120 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm22226-201ENSMUST00000157355 109 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm25459-201ENSMUST00000157953 114 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm23031-201ENSMUST00000157998 119 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm8419-201ENSMUST00000189886 412 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm3841-201ENSMUST00000191399 451 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm6631-201ENSMUST00000193699 559 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm43215-201ENSMUST00000199108 252 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm45473-201ENSMUST00000211452 616 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 AC166358.9-201ENSMUST00000220653 375 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 AC117769.2-201ENSMUST00000224612 469 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Glycam1-203ENSMUST00000228060 528 ntAPPRIS ALT2 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm6101-201ENSMUST00000195384 1867 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Olfr90-205ENSMUST00000216488 3188 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Ddx55Q6ZPL9 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Cdh7-203ENSMUST00000129923 1409 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm45172-201ENSMUST00000206054 1301 ntBASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm12193-201ENSMUST00000117250 379 ntBASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm15901-201ENSMUST00000117663 941 ntBASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm14173-201ENSMUST00000117690 278 ntBASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Olfr331-202ENSMUST00000170501 957 ntBASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm26923-201ENSMUST00000182615 996 ntBASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Ddx55Q6ZPL9 Gm21728-201ENSMUST00000188442 695 ntBASIC7.37□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms