Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm29745-201ENSMUST00000198005 687 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 AC151967.1-201ENSMUST00000198146 76 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm43505-201ENSMUST00000200579 139 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm44561-201ENSMUST00000208869 264 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC9.39□□□□□ -0.91
Clcn1Q64347 CU024910.1-201ENSMUST00000214310 418 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 AC107757.1-201ENSMUST00000226780 357 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Clcn1Q64347 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm10123-201ENSMUST00000075723 490 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm28651-202ENSMUST00000227968 2693 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm37326-201ENSMUST00000192828 3071 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC9.39□□□□□ -0.91
Clcn1Q64347 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC9.39□□□□□ -0.91
Clcn1Q64347 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Clcn1Q64347 Gm43665-201ENSMUST00000198672 1659 ntBASIC9.39□□□□□ -0.91
Clcn1Q64347 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Zkscan1-203ENSMUST00000110962 4843 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 AC120153.1-201ENSMUST00000226502 1311 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm37199-201ENSMUST00000193881 4065 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm12643-201ENSMUST00000116078 374 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm25553-201ENSMUST00000158076 79 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm23187-201ENSMUST00000175746 86 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm25284-201ENSMUST00000180345 141 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm16531-201ENSMUST00000180658 967 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm1972-201ENSMUST00000181606 964 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm28404-201ENSMUST00000190242 453 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm37111-201ENSMUST00000193250 634 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm38279-201ENSMUST00000194067 1131 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm43560-201ENSMUST00000198100 773 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm44472-201ENSMUST00000204922 943 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm4585-201ENSMUST00000207218 452 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm8125-201ENSMUST00000216602 738 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 AC133948.2-201ENSMUST00000217850 378 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 AC123061.2-201ENSMUST00000226234 802 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Gm6863-201ENSMUST00000052882 636 ntBASIC9.38□□□□□ -0.91
Clcn1Q64347 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Clcn1Q64347 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Clcn1Q64347 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Clcn1Q64347 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Clcn1Q64347 Gm7842-201ENSMUST00000217691 1379 ntBASIC9.37□□□□□ -0.91
Clcn1Q64347 AC154747.4-203ENSMUST00000225893 1384 ntBASIC9.37□□□□□ -0.91
Clcn1Q64347 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clcn1Q64347 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Clcn1Q64347 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
Clcn1Q64347 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clcn1Q64347 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clcn1Q64347 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Clcn1Q64347 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms