Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm37967-201ENSMUST00000195634 2665 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm22371-201ENSMUST00000104588 130 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm12115-201ENSMUST00000119969 447 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm23553-201ENSMUST00000157817 295 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm10177-201ENSMUST00000160052 444 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm15257-201ENSMUST00000177680 883 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm15252-201ENSMUST00000177750 883 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm15256-201ENSMUST00000177793 883 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm15260-201ENSMUST00000179402 883 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm17934-201ENSMUST00000192818 422 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm7570-201ENSMUST00000215246 698 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 AC154527.1-201ENSMUST00000225809 242 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Gm5436-201ENSMUST00000058103 643 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Aadac-201ENSMUST00000029325 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Vps54Q5SPW0 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm9521-201ENSMUST00000206656 1516 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm15332-201ENSMUST00000118386 357 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm24359-201ENSMUST00000158418 221 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm17366-201ENSMUST00000167629 187 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm33312-201ENSMUST00000222443 332 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Mcts1-201ENSMUST00000000365 783 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm26226-201ENSMUST00000082509 116 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Olfr519-201ENSMUST00000084752 960 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm3106-201ENSMUST00000179743 2383 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.42□□□□□ -1.22
Vps54Q5SPW0 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Sorbs2-214ENSMUST00000134675 1692 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Gm12583-201ENSMUST00000120677 853 ntBASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Gm12610-201ENSMUST00000139272 581 ntTSL 3 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Gm24435-201ENSMUST00000157886 110 ntBASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Esd-ps-201ENSMUST00000170684 847 ntBASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Gm23617-201ENSMUST00000175410 95 ntBASIC7.41□□□□□ -1.22
Vps54Q5SPW0 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC7.41□□□□□ -1.22
Vps54Q5SPW0 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms