Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.15□□□□□ -1.43
Scn2bQ56A07 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Scn2bQ56A07 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm37474-201ENSMUST00000194812 1814 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm8312-201ENSMUST00000119380 618 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm15164-201ENSMUST00000122203 271 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm23884-201ENSMUST00000122687 294 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Mir1953-201ENSMUST00000157866 89 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm25487-201ENSMUST00000158725 125 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm24812-201ENSMUST00000175315 284 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm5885-201ENSMUST00000178578 648 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 1700066C05Rik-201ENSMUST00000191029 407 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC122371.2-201ENSMUST00000220583 366 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC154431.2-201ENSMUST00000225215 1055 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.14□□□□□ -1.43
Scn2bQ56A07 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Scn2bQ56A07 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm44045-201ENSMUST00000204906 2520 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm15016-201ENSMUST00000117300 720 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm15901-201ENSMUST00000117663 941 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm13176-201ENSMUST00000117910 477 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm11472-201ENSMUST00000121305 556 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm12369-201ENSMUST00000121343 942 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm24359-201ENSMUST00000158418 221 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.13□□□□□ -1.43
Scn2bQ56A07 Gm43744-201ENSMUST00000196387 688 ntBASIC6.13□□□□□ -1.43
Scn2bQ56A07 Mark1-ps1-201ENSMUST00000198516 717 ntBASIC6.13□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms