Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm5947-201ENSMUST00000179156 714 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm5645-201ENSMUST00000179597 714 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm28918-201ENSMUST00000188822 699 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm3544-201ENSMUST00000196129 305 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 BC049739-201ENSMUST00000202626 660 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm44225-201ENSMUST00000203582 186 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm43928-201ENSMUST00000203737 409 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 1600020E01Rik-208ENSMUST00000205028 329 ntTSL 5 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 AC133203.1-201ENSMUST00000228241 301 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Gm37186-201ENSMUST00000195629 2861 ntBASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Upf3bQ3ULL6 Robo2-210ENSMUST00000226478 8059 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 AC130661.1-201ENSMUST00000218248 1680 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm24272-201ENSMUST00000102329 98 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm20549-201ENSMUST00000174804 429 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm29072-201ENSMUST00000191149 678 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm37901-201ENSMUST00000195107 514 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm5694-201ENSMUST00000195648 641 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm44984-201ENSMUST00000207802 394 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm19212-201ENSMUST00000216642 862 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 AC154904.1-201ENSMUST00000219510 312 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm18955-201ENSMUST00000223173 649 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 AC164107.1-202ENSMUST00000228953 1816 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 AC155710.1-201ENSMUST00000219913 1353 ntBASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Tra2b-201ENSMUST00000023564 1369 ntTSL 3 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Fbxo3-204ENSMUST00000111136 4211 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Upf3bQ3ULL6 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm13193-201ENSMUST00000117275 225 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm12262-201ENSMUST00000119915 305 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm37809-201ENSMUST00000195050 931 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm4332-201ENSMUST00000196114 346 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm1969-201ENSMUST00000198125 1220 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm43561-201ENSMUST00000199866 448 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm18422-201ENSMUST00000203663 1032 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm18863-201ENSMUST00000217004 1299 ntBASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Upf3bQ3ULL6 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 126.3 ms