Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 AW822073-201ENSMUST00000075305 555 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm26645-201ENSMUST00000181076 1316 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm7690-201ENSMUST00000190885 1399 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 AC107742.1-201ENSMUST00000227769 1390 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Gm18310-201ENSMUST00000206494 3912 ntBASIC6.42□□□□□ -1.38
Usp39Q3TIX9 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Olfr1239-203ENSMUST00000217181 1516 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm6558-201ENSMUST00000191934 1973 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm26079-201ENSMUST00000104066 133 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm24519-201ENSMUST00000104507 132 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm12447-201ENSMUST00000119110 470 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm14906-201ENSMUST00000119265 390 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm14900-201ENSMUST00000120304 733 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm15242-201ENSMUST00000122459 283 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Cfhr3-201ENSMUST00000170441 1022 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm27014-201ENSMUST00000182658 937 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm38330-201ENSMUST00000192743 959 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm38333-201ENSMUST00000193608 604 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Ighv8-3-201ENSMUST00000194985 295 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm44227-201ENSMUST00000203576 241 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm44422-201ENSMUST00000204142 1025 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm18012-201ENSMUST00000204558 773 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm18598-201ENSMUST00000207724 597 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm30933-201ENSMUST00000217174 381 ntTSL 2 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 AC131117.2-203ENSMUST00000225886 950 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 AC154419.1-201ENSMUST00000227627 272 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm25587-201ENSMUST00000082498 166 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm28874-201ENSMUST00000190917 3134 ntBASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Usp39Q3TIX9 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gm9603-201ENSMUST00000165814 2063 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gm3542-201ENSMUST00000169362 2063 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gm22781-201ENSMUST00000104083 137 ntBASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gm3931-201ENSMUST00000119038 455 ntBASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gm13462-201ENSMUST00000121472 961 ntBASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC6.4□□□□□ -1.38
Usp39Q3TIX9 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms