Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm12306-201ENSMUST00000117256 171 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm12635-201ENSMUST00000117285 752 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm14865-201ENSMUST00000117523 494 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm14991-201ENSMUST00000119913 598 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC7.42□□□□□ -1.22
Hmgb1P63158 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Mir3473c-201ENSMUST00000175262 81 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm27026-201ENSMUST00000183003 892 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm42558-201ENSMUST00000200982 265 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm43930-201ENSMUST00000203868 845 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm19761-201ENSMUST00000205372 391 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm45700-201ENSMUST00000205866 347 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm45122-201ENSMUST00000206376 784 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm45463-202ENSMUST00000210735 1188 ntTSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm7943-201ENSMUST00000212078 1034 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7.42□□□□□ -1.22
Hmgb1P63158 AC113198.1-201ENSMUST00000226353 832 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 AC107453.3-201ENSMUST00000228205 639 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 AW822073-201ENSMUST00000075305 555 ntBASIC7.42□□□□□ -1.22
Hmgb1P63158 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Olfr1171-ps1-202ENSMUST00000150178 1398 ntTSL 3 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Hmgb1P63158 AC125328.1-201ENSMUST00000226812 2265 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm29761-201ENSMUST00000215964 1939 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm14391-202ENSMUST00000109055 965 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm14631-201ENSMUST00000119067 594 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm12447-201ENSMUST00000119110 470 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm26025-201ENSMUST00000158655 271 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Mir6241-201ENSMUST00000184225 103 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm18875-201ENSMUST00000188563 882 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm43689-201ENSMUST00000195951 427 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm45247-201ENSMUST00000210757 309 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 AC122428.4-201ENSMUST00000213494 589 ntTSL 3 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm19181-201ENSMUST00000218891 940 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 AC122327.2-201ENSMUST00000220883 120 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 AC122327.3-201ENSMUST00000221852 120 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 AC166341.1-201ENSMUST00000223360 105 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 3300002A11Rik-201ENSMUST00000046994 654 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm6887-201ENSMUST00000080945 482 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Scgb1b27-201ENSMUST00000085618 493 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Defa-ps18-201ENSMUST00000098889 371 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Hmgb1P63158 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Hmgb1P63158 Gm6679-201ENSMUST00000191467 1869 ntBASIC7.41□□□□□ -1.22
Hmgb1P63158 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 2610203C20Rik-206ENSMUST00000181814 2996 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Hmgb1P63158 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Ighv14-1-201ENSMUST00000103463 351 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Hmgb1P63158 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 133.8 ms