Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Havcr1-201ENSMUST00000047568 1892 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
Sox1P53783 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC7.33□□□□□ -1.24
Sox1P53783 Gm15216-201ENSMUST00000118058 277 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm15923-201ENSMUST00000119300 1169 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm13622-201ENSMUST00000120658 433 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm12593-201ENSMUST00000120981 743 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm13282-201ENSMUST00000121577 545 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm15038-201ENSMUST00000122144 296 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm14380-201ENSMUST00000122298 431 ntBASIC7.33□□□□□ -1.24
Sox1P53783 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm9671-201ENSMUST00000171502 547 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm37884-201ENSMUST00000191857 818 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Sox1P53783 Gm6077-201ENSMUST00000196008 499 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm21040-201ENSMUST00000199493 1132 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm42760-201ENSMUST00000199814 311 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC7.33□□□□□ -1.24
Sox1P53783 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.33□□□□□ -1.24
Sox1P53783 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC7.33□□□□□ -1.24
Sox1P53783 Gm19032-201ENSMUST00000208584 592 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Olfr856-ps1-201ENSMUST00000212177 948 ntBASIC7.33□□□□□ -1.24
Sox1P53783 4930434F21Rik-201ENSMUST00000214381 742 ntTSL 5 BASIC7.33□□□□□ -1.24
Sox1P53783 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Sox1P53783 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Sox1P53783 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Sox1P53783 Gm37332-201ENSMUST00000195853 2844 ntBASIC7.33□□□□□ -1.24
Sox1P53783 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.33□□□□□ -1.24
Sox1P53783 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Gm37121-201ENSMUST00000192219 2556 ntBASIC7.33□□□□□ -1.24
Sox1P53783 Cep55-201ENSMUST00000096096 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
Sox1P53783 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Sox1P53783 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Sox1P53783 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Sox1P53783 AC158596.1-201ENSMUST00000217315 2265 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.32□□□□□ -1.24
Sox1P53783 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC7.32□□□□□ -1.24
Sox1P53783 AC101875.1-201ENSMUST00000222666 2223 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Gm6313-202ENSMUST00000150112 2562 ntTSL 2 BASIC7.32□□□□□ -1.24
Sox1P53783 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 AC156025.3-201ENSMUST00000225919 3095 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Sox1P53783 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.32□□□□□ -1.24
Sox1P53783 Snora35-201ENSMUST00000104579 128 ntBASIC7.32□□□□□ -1.24
Sox1P53783 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC7.32□□□□□ -1.24
Sox1P53783 Defb28-201ENSMUST00000121912 397 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm25904-201ENSMUST00000158491 143 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC7.32□□□□□ -1.24
Sox1P53783 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm9423-201ENSMUST00000183173 997 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm29263-201ENSMUST00000188718 463 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Gm18775-201ENSMUST00000190763 586 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Fabp9-202ENSMUST00000191678 647 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC7.32□□□□□ -1.24
Sox1P53783 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC7.32□□□□□ -1.24
Sox1P53783 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Sox1P53783 Gm18691-201ENSMUST00000203593 872 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Gm5886-202ENSMUST00000203957 522 ntBASIC7.32□□□□□ -1.24
Sox1P53783 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC7.32□□□□□ -1.24
Sox1P53783 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.32□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms