Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm27155-201ENSMUST00000183716 898 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Mir7029-201ENSMUST00000184777 61 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm6445-201ENSMUST00000189515 1112 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Ighv1-3-201ENSMUST00000192764 302 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm6123-201ENSMUST00000193658 1069 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm17918-201ENSMUST00000205315 574 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Gm44705-201ENSMUST00000206719 339 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rfx1P48377 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC8.2□□□□□ -1.1
Rfx1P48377 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.2□□□□□ -1.1
Rfx1P48377 AC157571.1-201ENSMUST00000222014 520 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC8.2□□□□□ -1.1
Rfx1P48377 AC164297.5-201ENSMUST00000224365 198 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rfx1P48377 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Rfx1P48377 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC8.2□□□□□ -1.1
Rfx1P48377 Cmah-208ENSMUST00000224819 9482 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC8.2□□□□□ -1.1
Rfx1P48377 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 AC154630.1-201ENSMUST00000215334 2440 ntBASIC8.2□□□□□ -1.1
Rfx1P48377 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC8.2□□□□□ -1.1
Rfx1P48377 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Rfx1P48377 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm9314-201ENSMUST00000199881 1528 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Rfx1P48377 Depdc1a-202ENSMUST00000106041 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm38082-201ENSMUST00000192800 6882 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm43613-201ENSMUST00000199409 1613 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm15348-201ENSMUST00000151188 3655 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC8.19□□□□□ -1.1
Rfx1P48377 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Gm23692-201ENSMUST00000101881 160 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm23529-201ENSMUST00000104562 132 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm15110-201ENSMUST00000117545 881 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm12944-201ENSMUST00000119262 463 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm15049-201ENSMUST00000120474 463 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm11891-201ENSMUST00000121241 619 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm5809-201ENSMUST00000121854 529 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm26480-201ENSMUST00000122619 297 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Gm23034-201ENSMUST00000158001 147 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC8.19□□□□□ -1.1
Rfx1P48377 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Gm20813-201ENSMUST00000186646 705 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm28859-201ENSMUST00000186650 616 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm21617-201ENSMUST00000188297 691 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm10640-202ENSMUST00000190947 1134 ntTSL 2 BASIC8.19□□□□□ -1.1
Rfx1P48377 Gm31123-201ENSMUST00000192094 666 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm8101-201ENSMUST00000192796 478 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm38305-201ENSMUST00000194825 223 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm26413-202ENSMUST00000198972 127 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm42652-201ENSMUST00000199073 614 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm44138-201ENSMUST00000204939 271 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC8.19□□□□□ -1.1
Rfx1P48377 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC8.19□□□□□ -1.1
Rfx1P48377 AC171206.1-201ENSMUST00000213612 213 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC8.19□□□□□ -1.1
Rfx1P48377 AC187103.4-201ENSMUST00000225399 300 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Rfx1P48377 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC8.19□□□□□ -1.1
Rfx1P48377 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Rfx1P48377 Thap6-201ENSMUST00000191860 3151 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Gm18310-201ENSMUST00000206494 3912 ntBASIC8.19□□□□□ -1.1
Rfx1P48377 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC8.19□□□□□ -1.1
Rfx1P48377 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Rfx1P48377 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms