Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Zfp994-201ENSMUST00000179996 4880 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.93□□□□□ -1.46
Tnfsf4P43488 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Gm26994-201ENSMUST00000182027 1571 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Tnfsf4P43488 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Olfr259-202ENSMUST00000213978 4046 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm37079-201ENSMUST00000194114 2135 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Vmn1r12-203ENSMUST00000227581 6490 ntAPPRIS ALT2 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm23979-201ENSMUST00000104071 128 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm24869-201ENSMUST00000104072 128 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Lrrc4-202ENSMUST00000171353 883 ntTSL 3 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm17934-201ENSMUST00000192818 422 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm7019-201ENSMUST00000194122 369 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm5306-201ENSMUST00000203325 757 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 AC132384.8-201ENSMUST00000218152 1204 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 AC122397.3-201ENSMUST00000227097 527 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 AC154563.1-201ENSMUST00000228317 442 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Hrh2-202ENSMUST00000209846 4074 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Stk4-202ENSMUST00000088291 4098 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 CT010453.1-201ENSMUST00000226795 2201 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm28231-201ENSMUST00000190118 2599 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Tnfsf4P43488 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.92□□□□□ -1.46
Tnfsf4P43488 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Tnfsf4P43488 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Tnfsf4P43488 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm25785-201ENSMUST00000104129 125 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm12442-201ENSMUST00000118372 338 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm8715-201ENSMUST00000162728 531 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm29496-201ENSMUST00000189854 693 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm37901-201ENSMUST00000195107 514 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm5318-201ENSMUST00000205249 406 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm18805-201ENSMUST00000206872 655 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm18600-201ENSMUST00000207205 505 ntBASIC5.91□□□□□ -1.46
Tnfsf4P43488 Gm45473-201ENSMUST00000211452 616 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms