Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Gm11799-201ENSMUST00000116110 460 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm27158-201ENSMUST00000183813 238 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm7626-201ENSMUST00000195801 353 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm43744-201ENSMUST00000196387 688 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.71□□□□□ -1.5
Hoxc5P32043 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.71□□□□□ -1.5
Hoxc5P32043 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 AL837512.1-201ENSMUST00000223914 1073 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 AC154250.1-201ENSMUST00000224775 489 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
Hoxc5P32043 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Hoxc5P32043 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm9877-201ENSMUST00000064271 2627 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 Apol10a-201ENSMUST00000060551 3033 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Hoxc5P32043 Gm45548-201ENSMUST00000210076 3167 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.71□□□□□ -1.5
Hoxc5P32043 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Rnf32-201ENSMUST00000001247 1600 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm43190-201ENSMUST00000187850 1779 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Trav19-201ENSMUST00000103674 446 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm25877-201ENSMUST00000104326 129 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm23768-201ENSMUST00000104440 131 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm4914-201ENSMUST00000119757 459 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm7494-201ENSMUST00000121248 441 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm15502-201ENSMUST00000121449 208 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm12929-201ENSMUST00000122406 370 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm15787-206ENSMUST00000141008 585 ntTSL 2 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm23762-201ENSMUST00000158348 106 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm21839-201ENSMUST00000179536 378 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm42963-201ENSMUST00000202943 1217 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm43906-201ENSMUST00000203194 906 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm8479-201ENSMUST00000203825 718 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.7□□□□□ -1.5
Hoxc5P32043 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 AC114008.1-201ENSMUST00000226193 937 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 AC135292.2-201ENSMUST00000227559 367 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Olfr548-ps1-201ENSMUST00000098228 933 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.7□□□□□ -1.5
Hoxc5P32043 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Hoxc5P32043 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.7□□□□□ -1.5
Hoxc5P32043 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.69□□□□□ -1.5
Hoxc5P32043 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.69□□□□□ -1.5
Hoxc5P32043 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc5P32043 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc5P32043 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc5P32043 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Hoxc5P32043 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxc5P32043 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm13870-201ENSMUST00000117214 1023 ntBASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm13193-201ENSMUST00000117275 225 ntBASIC5.69□□□□□ -1.5
Hoxc5P32043 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Hoxc5P32043 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm14863-201ENSMUST00000119648 307 ntBASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm14489-201ENSMUST00000120868 901 ntBASIC5.69□□□□□ -1.5
Hoxc5P32043 Gm12026-201ENSMUST00000120961 1024 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms