Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 AC163638.1-201ENSMUST00000224818 392 ntBASIC5□□□□□ -1.61
Sdc1P18828 AC122533.1-201ENSMUST00000225177 767 ntBASIC5□□□□□ -1.61
Sdc1P18828 AC125405.1-201ENSMUST00000226406 589 ntBASIC5□□□□□ -1.61
Sdc1P18828 CT025686.1-201ENSMUST00000227592 438 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm5316-201ENSMUST00000050391 270 ntBASIC5□□□□□ -1.61
Sdc1P18828 Gm10015-201ENSMUST00000072570 465 ntBASIC5□□□□□ -1.61
Sdc1P18828 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC5□□□□□ -1.61
Sdc1P18828 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC5□□□□□ -1.61
Sdc1P18828 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Gm20342-201ENSMUST00000185480 9720 ntBASIC5□□□□□ -1.61
Sdc1P18828 Mtx3-201ENSMUST00000076169 6275 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Sdc1P18828 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Sdc1P18828 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm19514-201ENSMUST00000206856 4489 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm43062-201ENSMUST00000196302 1319 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Sdc1P18828 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm37311-201ENSMUST00000195541 2024 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Olfr736-204ENSMUST00000215227 2485 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sdc1P18828 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm42507-201ENSMUST00000201187 2555 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm12075-201ENSMUST00000117426 397 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm13626-201ENSMUST00000119435 402 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm15801-201ENSMUST00000120920 522 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm14732-201ENSMUST00000121372 545 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 BC002163-201ENSMUST00000121906 319 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm15840-201ENSMUST00000122099 943 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC4.99□□□□□ -1.61
Sdc1P18828 Mir1930-201ENSMUST00000158799 84 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm8783-201ENSMUST00000159764 522 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm23631-201ENSMUST00000175291 123 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC4.99□□□□□ -1.61
Sdc1P18828 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm42963-201ENSMUST00000202943 1217 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm44044-201ENSMUST00000205178 1089 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm18537-201ENSMUST00000205709 989 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm18559-201ENSMUST00000208249 604 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC4.99□□□□□ -1.61
Sdc1P18828 AC153845.1-201ENSMUST00000213596 428 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sdc1P18828 CT033781.3-201ENSMUST00000221886 504 ntTSL 2 BASIC4.99□□□□□ -1.61
Sdc1P18828 AC154558.1-201ENSMUST00000222278 415 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 AC131187.2-201ENSMUST00000223936 994 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 CT009713.1-201ENSMUST00000224828 853 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 CT009556.3-201ENSMUST00000226173 513 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm5582-201ENSMUST00000075251 522 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Gm25133-201ENSMUST00000082647 130 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Snora30-201ENSMUST00000083325 130 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm37082-201ENSMUST00000192629 1927 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Sdc1P18828 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Sdc1P18828 Gm42702-201ENSMUST00000199515 4217 ntBASIC4.99□□□□□ -1.61
Sdc1P18828 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm43719-201ENSMUST00000200088 2199 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Sdc1P18828 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm37551-201ENSMUST00000195556 2861 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm14279-201ENSMUST00000117142 332 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm10243-201ENSMUST00000117571 333 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Gm8855-201ENSMUST00000118888 878 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Sdc1P18828 Gm13029-201ENSMUST00000137283 594 ntTSL 3 BASIC4.98□□□□□ -1.61
Sdc1P18828 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC4.98□□□□□ -1.61
Sdc1P18828 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 116.7 ms