Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm43546-201ENSMUST00000196721 943 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm24826-202ENSMUST00000197298 216 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdx1P18111 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Cdx1P18111 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm7463-201ENSMUST00000201541 547 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm42713-201ENSMUST00000202709 945 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm45136-201ENSMUST00000205793 943 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm44943-201ENSMUST00000207254 300 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm8291-201ENSMUST00000209635 1261 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 AC124184.1-201ENSMUST00000218167 283 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm2840-201ENSMUST00000048361 411 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm23734-201ENSMUST00000083753 109 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
Cdx1P18111 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm7048-201ENSMUST00000199395 1891 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 Gm43168-201ENSMUST00000201039 1612 ntBASIC5.19□□□□□ -1.58
Cdx1P18111 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Cdx1P18111 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 AC153912.2-201ENSMUST00000215840 2015 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Olfr1166-202ENSMUST00000217575 2004 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Slfn10-ps-202ENSMUST00000152760 2673 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 AC166574.5-201ENSMUST00000227438 1432 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm9144-201ENSMUST00000101625 1008 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx1P18111 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm12442-201ENSMUST00000118372 338 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm16248-201ENSMUST00000124238 243 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm16284-201ENSMUST00000140995 400 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm26183-201ENSMUST00000157685 139 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm17022-201ENSMUST00000166415 922 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm3760-201ENSMUST00000167475 804 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm7426-201ENSMUST00000179046 404 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm4856-201ENSMUST00000192696 1091 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm38291-201ENSMUST00000193671 259 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC5.18□□□□□ -1.58
Cdx1P18111 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm43595-201ENSMUST00000196464 1071 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC5.18□□□□□ -1.58
Cdx1P18111 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm6070-201ENSMUST00000207275 419 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm44566-201ENSMUST00000207638 304 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Cdx1P18111 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC5.18□□□□□ -1.58
Cdx1P18111 Gm10126-201ENSMUST00000221732 168 ntBASIC5.18□□□□□ -1.58
Cdx1P18111 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms