Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col1a1P11087 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Col1a1P11087 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm42440-201ENSMUST00000197906 2284 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm10062-201ENSMUST00000072180 1470 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col1a1P11087 AC156025.2-201ENSMUST00000225907 1533 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC7.3□□□□□ -1.24
Col1a1P11087 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Col1a1P11087 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Col1a1P11087 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.3□□□□□ -1.24
Col1a1P11087 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm44750-201ENSMUST00000206185 2223 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Akt3-203ENSMUST00000111160 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm5381-201ENSMUST00000117975 1250 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm22276-201ENSMUST00000122469 129 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Mir1970-201ENSMUST00000157839 104 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm26738-201ENSMUST00000181312 601 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm27355-201ENSMUST00000185045 128 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col1a1P11087 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col1a1P11087 Gm18865-201ENSMUST00000193011 1171 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gm37681-201ENSMUST00000193880 727 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC7.3□□□□□ -1.24
Col1a1P11087 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Col1a1P11087 AC122305.3-201ENSMUST00000214762 361 ntTSL 3 BASIC7.3□□□□□ -1.24
Col1a1P11087 AC159208.1-201ENSMUST00000221403 649 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 CT030645.3-201ENSMUST00000225483 1022 ntBASIC7.3□□□□□ -1.24
Col1a1P11087 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm4954-201ENSMUST00000135069 1601 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm43537-201ENSMUST00000199064 3110 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Hyal4-201ENSMUST00000031691 3269 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC7.29□□□□□ -1.24
Col1a1P11087 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm11318-201ENSMUST00000118640 961 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Gm13887-201ENSMUST00000119009 344 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Gm14098-201ENSMUST00000119295 623 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Gm8545-201ENSMUST00000120692 801 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm22867-201ENSMUST00000157499 109 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Gm24236-201ENSMUST00000157794 134 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Gm27004-201ENSMUST00000183300 727 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Mir6986-201ENSMUST00000184483 58 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC7.29□□□□□ -1.24
Col1a1P11087 Gm45820-201ENSMUST00000212068 362 ntTSL 3 BASIC7.29□□□□□ -1.24
Col1a1P11087 AC124826.1-201ENSMUST00000221651 325 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col1a1P11087 Nxpe4-203ENSMUST00000216998 4871 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Col1a1P11087 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC7.29□□□□□ -1.24
Col1a1P11087 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
Col1a1P11087 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Col1a1P11087 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Col1a1P11087 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms