Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Heatr9-201ENSMUST00000019069 1875 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Ncor1-204ENSMUST00000101066 8852 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 AC107453.1-201ENSMUST00000227490 3268 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Mir297a-2-201ENSMUST00000103795 90 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm14645-201ENSMUST00000118597 417 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm12803-201ENSMUST00000118907 821 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm12331-201ENSMUST00000119927 622 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm26351-201ENSMUST00000157532 232 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm24347-201ENSMUST00000158711 142 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm27342-201ENSMUST00000183530 109 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm43846-201ENSMUST00000200502 932 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr737-ps1-201ENSMUST00000205382 283 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm17890-201ENSMUST00000221419 757 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 AC138718.1-201ENSMUST00000225947 1009 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 AC125350.5-201ENSMUST00000226102 517 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr923-203ENSMUST00000213619 2846 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr545-202ENSMUST00000216116 3496 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Lpin1-207ENSMUST00000222989 4103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Ccdc127-203ENSMUST00000160021 2682 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 Ap3b1-201ENSMUST00000022196 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.26□□□□□ -1.41
Hoxd3P09027 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hoxd3P09027 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hoxd3P09027 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm18289-201ENSMUST00000203356 2989 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 P2ry4-201ENSMUST00000053373 4434 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Mei1-203ENSMUST00000188048 3197 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Hoxd3P09027 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Vmn2r-ps96-201ENSMUST00000221218 2545 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm14099-201ENSMUST00000117769 605 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm14251-201ENSMUST00000122133 279 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm25845-201ENSMUST00000122588 310 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm16196-201ENSMUST00000137730 464 ntTSL 3 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm25428-201ENSMUST00000157608 114 ntBASIC6.25□□□□□ -1.41
Hoxd3P09027 Gm23032-201ENSMUST00000157995 107 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms