Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Gm9788-201ENSMUST00000057038 906 ntBASIC6.21□□□□□ -1.42
Hcn3O88705 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hcn3O88705 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hcn3O88705 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hcn3O88705 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Hcn3O88705 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hcn3O88705 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Hcn3O88705 Gm45548-201ENSMUST00000210076 3167 ntBASIC6.21□□□□□ -1.42
Hcn3O88705 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Hcn3O88705 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.21□□□□□ -1.42
Hcn3O88705 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Hcn3O88705 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.42
Hcn3O88705 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.21□□□□□ -1.42
Hcn3O88705 Gm20644-201ENSMUST00000176721 2063 ntBASIC6.21□□□□□ -1.42
Hcn3O88705 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Fam35a-206ENSMUST00000228626 3100 ntBASIC6.21□□□□□ -1.42
Hcn3O88705 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Hcn3O88705 Gm37124-201ENSMUST00000192140 1992 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Hcn3O88705 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm25593-201ENSMUST00000102272 96 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Olfr1330-202ENSMUST00000105035 1027 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Hcn3O88705 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm13265-201ENSMUST00000118090 421 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm15078-201ENSMUST00000118371 782 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm12757-201ENSMUST00000119465 800 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm11617-201ENSMUST00000119609 639 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm15596-201ENSMUST00000121139 784 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Apol7d-203ENSMUST00000126516 1193 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm2976-201ENSMUST00000160362 513 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Mir6241-201ENSMUST00000184225 103 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Mir7058-201ENSMUST00000184637 75 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC6.2□□□□□ -1.42
Hcn3O88705 2310008N11Rik-201ENSMUST00000189978 568 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Igkv4-83-201ENSMUST00000196933 334 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm8454-201ENSMUST00000196980 811 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm2860-201ENSMUST00000199226 707 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm2221-201ENSMUST00000209342 418 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 2310008N11Rik-203ENSMUST00000210732 601 ntTSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 CT030124.1-201ENSMUST00000217130 235 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm46311-201ENSMUST00000217971 203 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm2398-201ENSMUST00000218347 883 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm18242-201ENSMUST00000218455 542 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hcn3O88705 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 Olfr948-201ENSMUST00000076516 966 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hcn3O88705 Olfr517-201ENSMUST00000084753 1055 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm6166-201ENSMUST00000098689 409 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hcn3O88705 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hcn3O88705 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Hcn3O88705 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Hcn3O88705 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Hcn3O88705 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.2□□□□□ -1.42
Hcn3O88705 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Hcn3O88705 Gm43496-201ENSMUST00000201682 3001 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms